Klaipeda is the main Lithuanian port connected by regular flights with the largest cities of the Baltic Sea coast: Kiel, Lübeck, Aarhus, Copenhagen, Gdańsk. The leading operators are the Latvian company Scandlines and Lisco. The cost of the ferry ticket to Klaipeda varies depending on the season. For example, a ferry ticket from Kiel to Klaipeda (travel time 26 hours) in one direction will cost 240 EUR in high season and 150 EUR in low season.

In addition, Klaipeda is connected by ferry communication with other Baltic countries and Kaliningrad the area of ​​Russia - for example, ferries to Klaipeda go from Baltiysk.

In addition to the main ferry terminal in Klaipeda there is the so-called Old Ferry linking the port with the Neringa resort on the Curonian Spit. A ferry ticket costs 2 EUR per person